Leonarski, Filip: search on Z-Library

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1

Revisiting GNRA and UNCG folds: U-turns versus Z-turns in RNA hairpin loops

D'Ascenzo, Luigi, Leonarski, Filip, Vicens, Quentin, Auffinger, Pascal

Journal:

Year:

2017

Language:

english

File:

PDF, 1.14 MB

english, 2017

2

105 Stabilization effects induced by modified nucleotides in tRNA T-loop motifs

Sydow, Dominique, Leonarski, Filip, D’Ascenzo, Luigi, Auffinger, Pascal

Journal:

Journal of Biomolecular Structure and Dynamics

Year:

2015

Language:

english

File:

PDF, 498 KB

english, 2015

3

New more accurate calculations of the ground state potential energy surface of H[sub 3][sup +]

Pavanello, Michele, Tung, Wei-Cheng, Leonarski, Filip, Adamowicz, Ludwik

Journal:

The Journal of Chemical Physics

Year:

2009

Language:

english

File:

PDF, 960 KB

english, 2009

4

Altering the Orientation of Proteins on Self-Assembled Monolayers: A Computational Study

Trzaskowski, Bartosz, Leonarski, Filip, Leś, Andrzej, Adamowicz, Ludwik

Journal:

Biomacromolecules

Year:

2008

Language:

english

File:

PDF, 3.02 MB

english, 2008

5

Charge asymmetry in pure vibrational states of the HD molecule

Bubin, Sergiy, Leonarski, Filip, Stanke, Monika, Adamowicz, Ludwik

Journal:

The Journal of Chemical Physics

Year:

2009

Language:

english

File:

PDF, 216 KB

english, 2009

6

Non-adiabatic corrections to the energies of the pure vibrational states of

Sergiy Bubin, Filip Leonarski, Monika Stanke, Ludwik Adamowicz

Journal:

Chemical Physics Letters

Year:

2009

Language:

english

File:

PDF, 414 KB

english, 2009

7

Binding of metals to purine N7 nitrogen atoms and implications for nucleic acids: A CSD survey

Leonarski, Filip, D’Ascenzo, Luigi, Auffinger, Pascal

Journal:

Inorganica Chimica Acta

Year:

2016

Language:

english

File:

PDF, 897 KB

english, 2016

8

Mg 2+ ions: do they bind to nucleobase nitrogens?

Leonarski, Filip, D'Ascenzo, Luigi, Auffinger, Pascal

Journal:

Nucleic Acids Research

Year:

2017

Language:

english

File:

PDF, 5.73 MB

english, 2017

9

Nucleobase carbonyl groups are poor Mg 2+ inner-sphere binders but excellent monovalent ion binders – A critical PDB survey

Leonarski, Filip, D'Ascenzo, Luigi, Auffinger, Pascal

Journal:

Year:

2018

Language:

english

File:

PDF, 1.13 MB

english, 2018

10

Fast and accurate data collection for macromolecular crystallography using the JUNGFRAU detector

Leonarski, Filip, Redford, Sophie, Mozzanica, Aldo, Lopez-Cuenca, Carlos, Panepucci, Ezequiel, Nass, Karol, Ozerov, Dmitry, Vera, Laura, Olieric, Vincent, Buntschu, Dominik, Schneider, Roman, Tinti, G

Journal:

Year:

2018

Language:

english

File:

PDF, 3.44 MB

english, 2018

11

RedMDStream: Parameterization and Simulation Toolbox for Coarse-Grained Molecular Dynamics Models

Leonarski, Filip, Trylska, Joanna

Journal:

Biophysical Journal

Year:

2015

Language:

english

File:

PDF, 723 KB

english, 2015

12

‘Z-DNA like’ fragments in RNA: a recurring structural motif with implications for folding, RNA/protein recognition and immune response

D'Ascenzo, Luigi, Leonarski, Filip, Vicens, Quentin, Auffinger, Pascal

Journal:

Nucleic Acids Research

Year:

2016

Language:

english

File:

PDF, 5.03 MB

english, 2016

13

Modeling Tubulin at Interfaces. Immobilization of Microtubules on Self-Assembled Monolayers

Trzaskowski, Bartosz, Leonarski, Filip, Leś, Andrzej, Adamowicz, Ludwik

Journal:

Journal of Physical Chemistry B

Year:

2005

Language:

english

File:

PDF, 917 KB

english, 2005

14

JUNGFRAU detector for brighter x-ray sources: Solutions for IT and data science challenges in macromolecular crystallography

Leonarski, Filip, Mozzanica, Aldo, BrÃ¼ckner, Martin, Lopez-Cuenca, Carlos, Redford, Sophie, Sala, Leonardo, Babic, Andrej, Billich, Heinrich, Bunk, Oliver, Schmitt, Bernd, Wang, Meitian

Journal:

Structural Dynamics

Year:

2020

Language:

english

File:

PDF, 2.13 MB

english, 2020

15

Natural hybrid silica/protein superstructure at atomic resolution

GÃ¶rlich, Stefan, Samuel, Abisheik John, Best, Richard Johannes, Seidel, Ronald, Vacelet, Jean, Leonarski, Filip Karol, Tomizaki, Takashi, Rellinghaus, Bernd, Pohl, Darius, Zlotnikov, Igor

Journal:

Proceedings of the National Academy of Sciences

Year:

2020

File:

PDF, 1.63 MB

2020

16

Asymmetric Behavior of Thymidylate Synthase Dimer Subunits in Denaturating Solvent Observed with Molecular Dynamics

Leonarski, Filip, Świniarska, Monika, Leś, Andrzej

Journal:

Computational Biology Journal

Year:

2015

Language:

english

File:

PDF, 3.94 MB

english, 2015

17

Thermodynamics of the fourU RNA thermal switch derived from molecular dynamics simulations and spectroscopic techniques

Leonarski, Filip, Jasiński, Maciej, Trylska, Joanna

Journal:

Year:

2019

Language:

english

File:

PDF, 4.29 MB

english, 2019

18

Evolutionary Algorithm in the Optimization of a Coarse-Grained Force Field

Leonarski, Filip, Trovato, Fabio, Tozzini, Valentina, Leś, Andrzej, Trylska, Joanna

Journal:

Journal of Chemical Theory and Computation

Year:

2013

Language:

english

File:

PDF, 2.51 MB

english, 2013

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